Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS18625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCTTGCAACT-N45-AGTTGCAAGC | 266816 | 266880 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ACAAAGGCCACC-N4-GGTGGCCTTTGT | 266832 | 266859 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AGCTGCAAGA-N24-TCTTGCAGCT | 266885 | 266928 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 61 | 266833 | 266858 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 62 | 266837 | 266854 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCATAAAAAA-N27-TTTTTTATGG | 268513 | 268559 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAAAAATGCCCCG-N12-CGGGGCATTTTTT | 268518 | 268555 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 63 | 268524 | 268549 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |