Motif View

Internal ID 18930196
Source Database TransTermHP TERM 63
Feature Type terminator
Name
Rho-independent transcription terminator TERM 63
Sequence TGCCCCGTATCCAGCGATGCGGGGCA
Look for more occurrences
Start 268524
End 268549
Strand +
Genomic Context
Replicon Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTAACCATAAAAAAA(5' tail) TGCCCCGTATC(5' stem) CAGC(loop) GATGCGGGGCA(3' stem) TTTTTTATGGGCGAG(3' tail). Confidence: 100. opp_overlap 268524

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685