Pseudomonas sp. StFLB209, PSCI_RS09605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. StFLB209
GCF_000829415.1|latest |
| Locus Tag |
PSCI_RS09605
|
| Name |
Synonym: PSCI_1897 |
| Replicon | chromosome |
| Genomic location | 2080708 - 2082774 (- strand) |
Cross-References
| RefSeq | WP_045485659.1 |
| GI | 780132780 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein ImpA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.37 |
| Kyte-Doolittle Hydrophobicity Value | -0.577 |
| Molecular Weight (kDa) | 77.5 |
| Isoelectric Point (pI) | 5.71 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000090 (3342 members) |
| Putative Inparalogs |
2 predicted inparalogs type VI secretion protein ImpA (PSCI_RS09590) 91.6% identity type VI secretion protein ImpA (PSCI_RS09590) 93.5% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSCI_RS09605
Search term: type VI secretion protein ImpA
|
Human Homologs
References
No references are associated with this feature.