Pseudomonas sp. StFLB209, PSCI_RS09605

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pses03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:2.40.50.230:FF:000001	Type VI secretion protein VgrG	-	-	354	456	6.5E-61
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	11	522	0.0
Gene3D	G3DSA:2.30.110.50	-	-	-	15	331	9.9E-130
PANTHER	PTHR32305	-	-	-	37	622	1.0E-91
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	363	451	1.39E-35
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	385	452	1.9E-14
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	23	505	0.0
Gene3D	G3DSA:4.10.220.110	-	-	-	224	286	9.9E-130
Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	IPR010609	Gp5, C-terminal	528	551	5.3E-5
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	354	456	3.1E-44
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	12	184	2.42E-61
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	441	687	6.98E-53
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	31	329	3.1E-101
FunFam	G3DSA:3.55.50.10:FF:000001	Actin cross-linking toxin VgrG1	-	-	98	189	3.1E-42
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	360	1.55E-34
Gene3D	G3DSA:3.55.50.10	-	-	-	98	189	9.9E-130

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.