Pseudomonas sp. M1, PM1_RS09950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M1 - Assembly GCF_000317185.3
GCF_000317185.3|latest
Locus Tag
PM1_RS09950
Name
Synonym: PM1_0210095
Replicon PM1contig_002
Genomic location 2017109 - 2017747 (+ strand)

Cross-References

RefSeq WP_009623460.1
GI 497309243

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) -4.66
Kyte-Doolittle Hydrophobicity Value -0.039
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 5.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7M1M HYDROLASE 03/13/21 Crystal structure of Pseudomonas aeruginosa ClpP1 Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 93.9

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003596 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PM1_RS09950

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value: 1.4e-59
Percent Identity: 57.3

References

No references are associated with this feature.