Pseudomonas sp. M1, PM1_RS09950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTGCCCAAGGCCCTGATCGGCAACGAAGTGAACCGTCTGCGCGTGCAGGCCGTCCAGCAGTTCGGCGGCAACATCAAGCCCGAGCAACTGCCGGCCGAG CTGTTCGAAGAGCAGGCCAAGCGCCGCGTGGTCCTGGGCCTGATCGTCGCCGAGCTGGTCAAGCAGCACGAGCTGAAGGCCGACGAAGCCCGCGTTCGCG AGATGATCGAAGAGATGGCTTCGGCCTACCAGGAGCCCGAGCAAGTGGTCGCCTGGTACTACAAGAACGACCAGCAACTGAACGAAGTGCGCTCGGTTGT ACTGGAAGAACAAGTTGTAGATACTGTCCTGCAGAAGGCCAAAGTGACCGATAAGCAGGTATCCTACGAAGACGCGGTCAAGCCTGCTGAAGCTCCTGTG GCGGCCTGATCCAACCCTTCGTTCGATCGTCATAAGCCAGCCCTCGGGCTGGCTTATGTCTTTGAGACATATCTATTTCATTAGGGAGTGATCGTCGGAC
DNA Sequence for Gene
>PM1_RS09950
ATGCCGAATACCTTCATGCCGCAAGTTCCGAACATCCAGGCCGCCGGTGGCCTTGTGCCGATGGTGGTGGAGCAGTCCGCCCGCGGTGAGCGTTCCTACG ACATCTATTCGCGCCTGCTGAAGGAGCGGATCATCTTCCTGGTCGGCCAGGTCGAGGACTACATGGCCAACCTGGTGGTGGCCCAGCTGCTGTTCCTCGA AGCCGAGAACCCGGACAAGGACATCCACCTGTACATCAACTCGCCGGGCGGTTCGGTGACTGCCGGCATGTCCATCTACGACACCATGCAGTTCATCAAG CCGGACGTGTCGACCATCTGCGTCGGCCAGGCCTGCAGCATGGGCGCGCTGCTCCTGGCGGGCGGCGCCGCCGGCAAGCGCTACTGCCTGCCGCACTCGC GGATGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGCCAGGCCTCGGACATCGAGATCCACGCCAAGGAAATCCTCTTCATCAAGGAGCGCCTGAACCA GGTGCTGGCGCACCACACCGGCCAGCCGCTGGACGTCATCGCCCGCGACACCGACCGCGACCGCTTCATGAGCGGCGAGGAAGCGGTGCAATATGGTCTG ATCGATCAGGTTTACACTCAGCGCCCCTCGGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTTTCCGCTCGAACGCGGCCGGGCGACCGGCCGTTTCGCGGGCTTGAAAATGCCCGCATTTGCCTTCATCTTGTGTTTCAAGCCCTATCCGACTGGAA CGATCTAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTGTATTGCTCCTTCTGCGGCAAGAGCCAGCACGAAGTGCGCAAGTTGATTGCC GGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAACGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCGGAGAGTAGCGCGCACAAGC TTCCGGCGCCGAAAGAGATCCGTTCCATCCTCGATCAATACGTGATCGGCCAGGAACGTGCCAAGAAAACCCTGGCGGTAGCGGTCTACAACCACTACAA GCGCCTGAATCAGCGCGACCGCAAGGACGACGTCGAGCTGGGCAAGAGCAACATCCTGCTGATCGGGCCGACCGGCTCGGGCAAGACGCTGCTCGCCGAG
Amino Acid Sequence
>ATP-dependent Clp protease proteolytic subunit
MPNTFMPQVPNIQAAGGLVPMVVEQSARGERSYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIK PDVSTICVGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAKEILFIKERLNQVLAHHTGQPLDVIARDTDRDRFMSGEEAVQYGL IDQVYTQRPSAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site