Pseudomonas sp. M1, PM1_RS09950

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004176	ATP-dependent peptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00493	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006508	proteolysis	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00493	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004252	serine-type endopeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00493	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd07017	S14_ClpP_2	IPR001907	ATP-dependent Clp protease proteolytic subunit	34	204	6.12878E-106
PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	17	210	6.1E-99
PRINTS	PR00127	Clp protease catalytic subunit P signature	IPR001907	ATP-dependent Clp protease proteolytic subunit	34	49	2.7E-53
PRINTS	PR00127	Clp protease catalytic subunit P signature	IPR001907	ATP-dependent Clp protease proteolytic subunit	105	122	2.7E-53
Pfam	PF00574	Clp protease	IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	28	207	1.2E-88
Gene3D	G3DSA:3.90.226.10	-	-	-	9	211	1.9E-90
SUPERFAMILY	SSF52096	ClpP/crotonase	IPR029045	ClpP/crotonase-like domain superfamily	26	208	1.1E-75
PRINTS	PR00127	Clp protease catalytic subunit P signature	IPR001907	ATP-dependent Clp protease proteolytic subunit	74	94	2.7E-53
Hamap	MF_00444	ATP-dependent Clp protease proteolytic subunit [clpP].	IPR001907	ATP-dependent Clp protease proteolytic subunit	18	208	44.18084
NCBIfam	TIGR00493	JCVI: ATP-dependent Clp endopeptidase proteolytic subunit ClpP	IPR001907	ATP-dependent Clp protease proteolytic subunit	18	206	9.0E-105
PRINTS	PR00127	Clp protease catalytic subunit P signature	IPR001907	ATP-dependent Clp protease proteolytic subunit	183	202	2.7E-53
PRINTS	PR00127	Clp protease catalytic subunit P signature	IPR001907	ATP-dependent Clp protease proteolytic subunit	126	145	2.7E-53
FunFam	G3DSA:3.90.226.10:FF:000001	ATP-dependent Clp protease proteolytic subunit	-	-	17	209	5.2E-103

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.