Pseudomonas sp. VLB120, PVLB_04915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. VLB120
GCF_000494915.1|latest |
| Locus Tag |
PVLB_04915
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1114898 - 1116250 (+ strand) |
Cross-References
| RefSeq | YP_008761917.1 |
| GI | 557221702 |
| EC Number | 5.5.1.2 |
| Entrez | 17495568 |
| NCBI Locus Tag | PVLB_04915 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-carboxy-cis,cis-muconate cycloisomerase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.04 |
| Kyte-Doolittle Hydrophobicity Value | 0.031 |
| Molecular Weight (kDa) | 48337.0 |
| Isoelectric Point (pI) | 6.46 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1RE5 | ISOMERASE | 11/06/03 | Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida | Pseudomonas putida | 2.6 | X-RAY DIFFRACTION | 95.3 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000229 (504 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PVLB_04915
Search term: 3-carboxy-cis,cis-muconate cycloisomerase
|
Human Homologs
References
No references are associated with this feature.