Pseudomonas sp. VLB120, PVLB_04915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACACGGCGGGGATGAACGCCAAGAGCGCAAGCTTCGTGATGACCGGCGCGTTGTTCCTGTTCATGATCCTACAGCCGTTCTTCGGCATGCTCTCCGACCG AATCGGTCGACGTAACTCGATGCTGCTGTTCGGCGCTTTGGGCACCCTGTTCACCGTCCCGCTGCTGATGGCGCTCAAGACCGTGACCAGCCCGTTCGTG GCCTTCGTGCTGGTGACGCTGGCCCTGTGCATCGTCAGTTTCTACACCTCGATCAGCGGCCTGGTGAAGGCCGAAATGTTCCCGCCGCAGGTGCGTGCGC TGGGTGTGGGCCTGGCCTATGCGGTGGCCAACGCCATGTTCGGCGGTTCCGCCGAATACGTTGCCCTGGGCTTGAAAACCATGGGCATGGAGAACACCTT CTACTGGTACGTGACGGCCATGATGGCAGTTGCCTTCCTGTTCAGCCTACGACTGCCGAAGCAGGCAGCGTACCTGCATCACGATCATTAAGGACGTTGC
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| DNA Sequence for Gene |
>PVLB_04915
ATGAGCAATCTGCTGTTCGACGCTTATTTCACCGCACCGGCCATGCGTGAGATTTTCTCCGACCGTGGCCGGCTGCAGGGCATGCTCGATTTCGAAGCCG CCTTGGCCCGTGCCGAAGCCAGCGCCGGGCTGGTACCGCACAGTGCGGTGGCCGCCATCGAGGCGGCCTGCCACGCCGAGCGCTACGATGCCCGCGCCTT GGCCGATGCCATCGCCACTGCCGGCAACTCGGCTATCCCCTTGGTGAAGGCGTTGGGCAAGGTCATCGCCAGTGGTGTGCCTGAAGCCGAGCGCTATGTG CACCTGGGCGCCACCAGCCAGGATGCCATGGACACCGGTTTGGTCCTGCAACTTCGCGATGCGCTCGACATGATCGAAGCGGACCTCGGCAAGCTTGCCG AGACCCTCGCGCACCAGGCTTTGCAGCACGCCGACACCCCGCTGGTGGGCCGCACCTGGCTGCAGCACGCCACGCCGGTGACCCTGGGCATGAAGCTGGC CGGCGTACTCGGTGCTCTGACCCGTCACCGCCAGCGCCTCAAGGAGCTGCGTCCGCGTCTGCTGGTGCTGCAGTTCGGTGGCGCGTCCGGCAGCCTCGCG GCCTTGGGCAATAAAGCGATGCCGGTCGCAGAGGCCCTGGCTGAACAACTCAAGTTGACCTTGCCTGAGCAACCCTGGCACACCCAGCGTGATCGCCTGG TGGAATTCGCCTCGGTGCTGGGCCTCATCGCTGGCAGCCTGGGCAAGTTCGGGCGGGATATCAGCCTGTTGATGCAGACCGAGGCGGGGGAAGTGTTCGA GCCTTCCGCGCCGGGCAAGGGCGGCTCTTCGACCATGCCGCACAAGCGTAATCCGGTGGGCGCGGCGGTACTGATCGGTGCTGCCACTCGTGTGCCGGGC CTGCTGGCGACCATGTTCGCGGCCATGCCTCAAGAGCACGAGCGCAGCCTTGGCCTGTGGCATGCCGAATGGGAGACCCTGCCAGACATCTGCTGCCTGG TCTCTGGCGCGCTGCGCCAGGCCCAGGTGATTGCCGAGGGGATGGAAGTCGATGGTGAACGCATGCGCCGCAACCTCGACCTGACCCAAGGCCTGGTGCT GGCCGAAGCCGTGAGTATCGTGCTTGCCCAACGCCTGGGCCGTGACCATGCCCACCACCTGCTGGAGCAATGCTGCCAGCGTGCCGTGGCCGAGCAGCGC CACCTGCGCGCCGTGCTCGGTGACGAGCCGCAGGTCAGCGCCGAGCTGTCCGCCGAAGAGCTGGACCGCCTGCTCGATCCTGCCCATTACCTTGGCCAAG CCCGCGTCTGGGTGGCGCGTGCCGTGGCCGAACATCAACGTTTCACTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGAGACCGCTGTGGCGCAATTGCAACTGGCCGATGGCGTATTGAACTACCAACTCGACGGCCCGCAAGACGCACCGGTGCTGGTGCTGTCCAACTCGCT CGGCACCGACCTGGGCATGTGGGACAGTCAGATTCCGCTGTGGAGCGAGCACTTCCGGGTGCTGCGCTACGACACCCGTGGCCATGGCGGGTCGCTGGTT ACCGAAGGCCCTTACAGCATCGAACAGCTGGGGCGTGACGTGCTGGCGCTGCTCGATGGTCTGGATATCGAGCACGCGCATTTCGTGGGCCTGTCGATGG GCGGCCTGATCGGCCAGTGGCTGGGTATCAATGCCGGTGCACGCCTGCACAGCCTGACGCTGTGCAATACCGCCGCCAAGATCGCCAATGACGAGGTGTG GAACACCCGCATCGACACCGTGCTCAAAGGTGGCCAGCAGGCCATGGCTGACCTGCGTGACGCCTCCATCGCCCGCTGGTTCACCCCAGGCTTCGCCCAG
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| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MSNLLFDAYFTAPAMREIFSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACHAERYDARALADAIATAGNSAIPLVKALGKVIASGVPEAERYV HLGATSQDAMDTGLVLQLRDALDMIEADLGKLAETLAHQALQHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLKELRPRLLVLQFGGASGSLA ALGNKAMPVAEALAEQLKLTLPEQPWHTQRDRLVEFASVLGLIAGSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPG LLATMFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDGERMRRNLDLTQGLVLAEAVSIVLAQRLGRDHAHHLLEQCCQRAVAEQR HLRAVLGDEPQVSAELSAEELDRLLDPAHYLGQARVWVARAVAEHQRFTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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