Pseudomonas sp. CF149, CF149_12174

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. CF149
GCF_000416155.1|latest
Locus Tag
CF149_12174
NCBI Locus TagCF149_RS12025
Name
Replicon soap_scaffs_149.Contig23
Genomic location 10120 - 11010 (- strand)

Cross-References

RefSeq WP_019826196.1
GI 518664477
INSDC EPJ93387.1
NCBI Locus Tag CF149_RS12025
NCBI Old Locus Tag CF149_12174
UniParc UPI000356E236
UniProtKB Acc S6HX43
UniProtKB ID S6HX43_9PSED
UniRef100 UniRef100_S6HX43
UniRef50 UniRef50_G8Q4Y5
UniRef90 UniRef90_G8Q4Y5

Product

Feature Type CDS
Coding Frame 1
Product Name
high affinity branched-chain amino acid ABC transporter, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.20
Kyte-Doolittle Hydrophobicity Value 0.014
Molecular Weight (kDa) 32.8
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004529 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: CF149_12174

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 5.5e-14
Percent Identity: 25.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 5.5e-14
Percent Identity: 25.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 5.5e-14
Percent Identity: 25.5

References

No references are associated with this feature.