Pseudomonas sp. CF149, CF149_12174

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 27 217 2.3E-26
CDD cd03219 ABC_Mj1267_LivG_branched - - 12 283 1.79375E-107
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 7 289 6.92E-58
FunFam G3DSA:3.40.50.300:FF:000317 Amino acid ABC transporter ATP-binding protein - - 10 290 1.6E-124
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 9 293 5.3E-58
Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal 268 292 1.2E-11
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 36 267 3.8E-10
PANTHER PTHR45772 CONSERVED COMPONENT OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS-RELATED - - 7 294 3.3E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.