Pseudomonas fluorescens C1, VC33_RS02955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens C1
GCF_000967945.1|latest |
| Locus Tag |
VC33_RS02955
|
| Name |
Synonym: VC33_02960 |
| Replicon | contig_3 |
| Genomic location | 219440 - 221797 (- strand) |
Cross-References
| RefSeq | WP_046027029.1 |
| GI | 802108334 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase LigA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -21.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.152 |
| Molecular Weight (kDa) | 85.8 |
| Isoelectric Point (pI) | 5.20 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003829 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VC33_RS02955
Search term: NAD-dependent DNA ligase LigA
|
Human Homologs
References
No references are associated with this feature.