Pseudomonas chlororaphis UFB2 isolate Soil, VM99_RS11500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis UFB2 isolate Soil
GCF_001023535.1|latest |
| Locus Tag |
VM99_RS11500
|
| Name |
Synonym: VM99_11500 |
| Replicon | chromosome |
| Genomic location | 2616950 - 2617696 (+ strand) |
Cross-References
| RefSeq | WP_042730391.1 |
| GI | 757177897 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
amino acid ABC transporter permease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.89 |
| Kyte-Doolittle Hydrophobicity Value | 0.567 |
| Molecular Weight (kDa) | 27.8 |
| Isoelectric Point (pI) | 8.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001276 (497 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: VM99_RS11500
Search term: amino acid ABC transporter permease
|
Human Homologs
References
No references are associated with this feature.