Pseudomonas lutea DSM 17257, LT42_RS15005

Gene Feature Overview

Strain	Pseudomonas lutea DSM 17257 GCF_000759445.1|latest
Locus Tag	LT42_RS15005
NCBI Old Locus Tag	LT42_15475
Name	Synonym: LT42_15475
Replicon	Contig002
Genomic location	637435 - 640569 (+ strand)

Cross-References

RefSeq	WP_037014477.1
GI	739149963
INSDC	KGF63321.1
NCBI Locus Tag	LT42_RS15005
NCBI Old Locus Tag	LT42_15475
UniParc	UPI000512B8F9
UniProtKB Acc	A0A098SU35
UniProtKB ID	A0A098SU35_9PSED
UniRef100	UniRef100_A0A098SU35
UniRef50	UniRef50_P24177
UniRef90	UniRef90_A0A098SU35

Product

Feature Type	CDS
Coding Frame	1
Product Name	multidrug transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-0.72
Kyte-Doolittle Hydrophobicity Value	0.296
Molecular Weight (kDa)	112.4
Isoelectric Point (pI)	6.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name	Definition	Accession	Model Type (?)	SNP	Cutoff	Bit Score	Percent Identity	CARD Version
adeF	AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879]	ARO:3000777	protein homolog model		Strict	750.4	40.8	3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000417 (2093 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: LT42_RS15005 Search term: multidrug transporter

Human Homologs

References