Pseudomonas lutea DSM 17257, LT42_RS15005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGCGACAACGCTGCCAAGGTCAAGCTGGTGCTGGAAGACGGCAGCATTTATCCGGTCGAAGGCAAGCTTGAATTCTCCGAGGTCTCGGTTGACGAAAC CACTGGCTCGGTGACCTTGCGCGCCATGTTCCAGAACCCTGACCACACCCTGCTGCCGGGCATGTTCGTGCATGCGCGTCTGCAATCAGGCGTCGCAGCC AATGCGATTCTGGTGCCGCAACAAGGCATCACCCGTGACCTGAAAGGCACGCCGACGGCGCTGGTGGTCAACGCCGACAACAAGGTCGAAACGCGCACCC TCGTCGCCAACCGCACCATCGGCAGCGACTGGCTGGTCGAAAAAGGCCTGAACGCTGGTGATCGCGTCATCACCGAAGGCCTGCAATACGTCAAGCCAGG TGCCGAAGTGAAGGTGGCTGAAGCCAGCAATGTCAACGCAGAGAACCCGGCCCCTGCCCCGGCAACTGATAAAGCCGCAGGCAGTAAAGGGGAGTAATTC
DNA Sequence for Gene
>LT42_RS15005
ATGTCGAAATTCTTTATCGACCGGCCAATTTTCGCGTGGGTAATTGCCCTCGTGATCATGCTGGTGGGGACGCTGTCGATCCTCAAGTTACCGATCAACC AGTACCCGGCGATTGCGCCACCGGCCATCGCCATCCAGGTAACCTACCCGGGCGCCAACGCGCAAACCGTGCAGGACACCGTGGTTCAGGTGATCGAGCA GCAACTCAACGGTATCGACAACCTGCGTTATGTGTCCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACCGCGACGTTCAATCAGGGCACCAACCCG GACATCGCGCAGGTTCAGGTCCAGAACAAGCTCAACCTCGCCACCCCGCTGCTGCCGCAAGAAGTGCAGCAACAGGGCATCCGCGTGACCAAGGCGGTGA AAAACTTCCTGATGGTGGTTGGCCTGGTGTCCGAAGATGGCAGCATGGGCAAGGAAGACTTGTCCAACTACATCGTGTCGAACATGCAGGATCCGATCTC CCGTACCTCCGGTGTGGGTGACTTTCAGGTGTTCGGTGCGCAGTACGCGATGCGTATCTGGCTCGACCCGGCCAAGCTGAACAACTTCCAGCTGACGCCA GTCGACGTCAAAACCGCGATCACTGCCCAGAACGTTCAGGTGTCCTCCGGCCAGATCGGCGGCCTGCCTGCGCTCAAGGGTCAGCAGCTGAACGCTACGA TTATCGGTAAAACCCGTCTGCAGACCGCCGAACAGTTCGGCAATATTCTGCTGAAGGTCAATCAGGACGGTTCGCAGGTTCGCCTCAAAGACGTCGCCAA GGTTGGTCTGGGTGGCGAGAACTACAGCATCGACGCGCAGTTCAACGGCAAGCCGGCTTCCGGTCTGGCGATCAAGCTGGCGACCGGCGCGAATGCTCTG GACACCGCCAAGGCGATCCGCGCCACGATCTCCCAGCTGGAACCTTTCTTCCCGCCTGGCATGAAAGTGGTTTACCCGTACGACACCACACCGGTTGTTC AGGAATCGATCACCGGCGTGGTTCATACCCTGGGTGAGGCGATCATCCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAAAACTTCCGCGCAACGATCAT CACCACGATGACCGTCCCGGTAGTATTGCTGGGTACCTTCGGGATCCTCGCGGCAGCCGGCTTCACCATCAACACGCTGACCATGTTCGGGGTGATCCTG GCCATCGGCTTGCTGGTGGACGATGCCATCGTCGTGGTGGAAAACGTCGAGCGGGTAATGGCGGAAGACAAACTTTCGCCGCGTGACGCGACGATCAAGT CCATGGAGCAGATCCAGGGGGCGCTGGTCGGTATCGCACTGGTTCTGTGTGCGGTGCTGTTGCCAATGGCCTTCTTCGGCGGCTCGACCGGTGTGATTTA CCGGCAGTTCTCGATCACCATCGTTTCGGCAATGGCGCTGTCGGTGCTGGTCGCATTGATCTTCACCCCGGCGTTGTGTTCGACCCTGCTCAAGCCGATT GACCATGAGAAACACGGGCAGCCGAAACGTGGATTCTTTGGCTGGTTCAACCGCACCTTCGACCGCAGCGTACTGAGCTACGAGCGCGGCGTGGGCAATA TGATCAAGCACAAGATCCCGGCCTACATCGTCTACGTGCTGATCGTCTGCGGCACCATCTGGATGTTTACCCGCATCCCGAGCGCGTTCCTGCCGGAAGA AGACCAGGGCGTGATCTTCGCTCAGGTGCAGACCCCTCCAGGCTCGTCGGCAGAACGCACGCAGACCGTCATCGACAACATGCGCAAGTACCTGCTTGAA GAAGAGTCCGGCGCGGTCAACTCGGTGTTCACCGTGAACGGCTTCAACTTCGCCGGCCGCGGTCAAAGCTCGGGCCTTGCGTTCATCATGCTCAAGCCGT GGGGCGATCGTGATGCGTCCAACAGCGTGTTCGAGTTGGCCAAACGGGCGCAGCAGCACTTCTTCGGCTTCCGTGATGCGATGACCTTTGCGGTCGTGCC GCCAGCGGTACTGGAGCTGGGTAACGCCACCGGTTTTGACGTTTATCTGCAGGATCAGGGCGGCGTGGGTCATGCCAAGCTGATGGAAGCGCGTAACCAA CTGCTGGGTATGGCGGCGCAGAGCAAGGTTCTGGCGGGCGTACGTCCGAACGGTCTGAACGATGAGCCGCAATACCAGCTGGTGATTGACGACGAGCGCG CGCAGGCATTGGGCCTGAGCCTGTCGGACATCAACACCACGCTGTCCATCGCGATGGGTGGCAACTACGTCAACGACTTCATCGACCGCGGTCGGGTCAA GAAGGTGTACGTGCAAGGCGATGCCAGTGCGCGGATGAAGCCCGAAGACCTGAAGAAGTGGTACGTGCGCAACAGCTCCGGCGAAATGGTCCCGTTCGCC TCGTTCGCGACCGGCGAGTGGGTGTTCGGTTCGCCAAAACTGTCGCGTTACAACGGTGTCCCTGCCGAAGAAGTTCTGGGTACGCCGGCACCTGGCTACA GTACCGGTCAGGCCATGGCCGAGGTCGAGCAACTGGCGAAGAAACTGCCAGCTGGCGTTGGCCTTTCCTGGACAGGCCTGTCCTATGAGGAGCGCCTGTC CGGTTCGCAGGCACCGGCGTTGTACGCGCTGTCCATTCTGATCGTGTTCCTGTGTCTGGCGGCGTTGTACGAAAGCTGGTCCATTCCGATCGCGGTCTTG CTGGTCATTCCGCTGGGGGTCATCGGTGCGCTGATGGCAACGAGCTTGCGCGGGCTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGGTGACGGTGG GTCTGGCGGCGAAAAACGCCATCCTTATCGTCGAGTTCGCCAAGGAATTGCACGAACAAGGCAAAGGGATCGTCGAGGCGACCATCGAGGCGTGTCGGAT GCGTCTGCGGCCGATCGTGATGACGTCCATGGCGTTCATCCTCGGTGTGGTCCCGCTGGCCATTTCGTCGGGCGCCGGTGCCGGTAGCCAGCATTCGATC GGTACGGGCGTGATCGGCGGTATGATTACCGCGGTTATTCTCGCGATCTTCTGGGTACCGCTGTTCTTCGTTTCGGTATCCTCGCTGTTCAAAGGCAAAC AGAAACACACTCCACACGATGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCCCTGATCTCGCTGGCAGTCACCGCGTTCATTCTCGGCGGCTGCTCGTTGATCCCCGAGTACCAGCAACCCGCCGCGCCAGTGCCCGCGCAGTT TCCTCAAGGTCCGGCATACTCGCCGGCCCAGGCGGCCAACCAGGCAGCGGCCGAGCAAGGCTGGCGTCAGTTTTTCCATGACCCGGCGCTGCAGCAGCTG ATTCAGACGTCGCTGCAAAACAACCGTGACCTGCGCGTTGCGGCGCTCAACATCGACGCTTACCGCGCGCAGTACCGCATTCAACGTGCGGATCTGTTTC CGGGCGTAGCGGCTTCGGCTACCGGTACTCGCCAGCGTGTACCGGGCGATCTGTCACAAACAGGCGAGTCCCGCATCACCAGTCAGTATTCGGTAGGGCT GGGGGTAAGTTCGTACGAGCTGGACCTGTTCGGCCGCGTACGCAGCCTGAGTGAGCAGGCGCTGCAGACCTACTTTGCCGGTGAAGAGGGTCGTCGCAGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGTLSILKLPINQYPAIAPPAIAIQVTYPGANAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNP DIAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVVGLVSEDGSMGKEDLSNYIVSNMQDPISRTSGVGDFQVFGAQYAMRIWLDPAKLNNFQLTP VDVKTAITAQNVQVSSGQIGGLPALKGQQLNATIIGKTRLQTAEQFGNILLKVNQDGSQVRLKDVAKVGLGGENYSIDAQFNGKPASGLAIKLATGANAL DTAKAIRATISQLEPFFPPGMKVVYPYDTTPVVQESITGVVHTLGEAIILVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAAGFTINTLTMFGVIL AIGLLVDDAIVVVENVERVMAEDKLSPRDATIKSMEQIQGALVGIALVLCAVLLPMAFFGGSTGVIYRQFSITIVSAMALSVLVALIFTPALCSTLLKPI DHEKHGQPKRGFFGWFNRTFDRSVLSYERGVGNMIKHKIPAYIVYVLIVCGTIWMFTRIPSAFLPEEDQGVIFAQVQTPPGSSAERTQTVIDNMRKYLLE EESGAVNSVFTVNGFNFAGRGQSSGLAFIMLKPWGDRDASNSVFELAKRAQQHFFGFRDAMTFAVVPPAVLELGNATGFDVYLQDQGGVGHAKLMEARNQ LLGMAAQSKVLAGVRPNGLNDEPQYQLVIDDERAQALGLSLSDINTTLSIAMGGNYVNDFIDRGRVKKVYVQGDASARMKPEDLKKWYVRNSSGEMVPFA SFATGEWVFGSPKLSRYNGVPAEEVLGTPAPGYSTGQAMAEVEQLAKKLPAGVGLSWTGLSYEERLSGSQAPALYALSILIVFLCLAALYESWSIPIAVL LVIPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKGIVEATIEACRMRLRPIVMTSMAFILGVVPLAISSGAGAGSQHSI GTGVIGGMITAVILAIFWVPLFFVSVSSLFKGKQKHTPHDEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site