Pseudomonas sp. VLB120, PVLB_22305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_22305
Name
Replicon chromosome
Genomic location 4922342 - 4924231 (- strand)

Cross-References

RefSeq YP_008765367.1
GI 557225152
Entrez 17499084
INSDC AGZ37240.1
NCBI Locus Tag PVLB_22305
UniParc UPI0003C0ADAF
UniProtKB Acc U5VN96
UniProtKB ID U5VN96_9PSED
UniRef100 UniRef100_U5VN96
UniRef50 UniRef50_G8PXZ8
UniRef90 UniRef90_Q1I4F4

Product

Feature Type CDS
Coding Frame 1
Product Name
penicillin-binding protein 2
Synonyms
Evidence for Translation
Charge (pH 7) 8.84
Kyte-Doolittle Hydrophobicity Value -0.339
Molecular Weight (kDa) 70.4
Isoelectric Point (pI) 9.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 575 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001680 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_22305

Human Homologs

References

No references are associated with this feature.