Pseudomonas sp. VLB120, PVLB_22305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
GAATAAGGAAGCGTCGTGCGTCTGCGCCTGATCGCGGTCGGCTCGCGCATGCCCAAGTGGGTCGAGGACGGTTGGCATGAATATGCCAAGCGCCTGCCCC CTGAGCTGTCGCTGGAGCTGGTGGAAATCCCGCTGAACACTCGTGGCAAGAATGCCGACGTCGCCCGCCTGATCCGTCAGGAGGGCGAAGCCATGCTGAG CAAGGTTCAGCCTGGGGAACGCATCGTCACGCTCGAGGTCCATGGCAAGCCCTGGAGCACCGAGCAGTTGGCGACCGAGTTGGACCGCTGGCGCCTGGAC GCGCGCACGGTGAATTTGATGGTGGGTGGCCCGGAAGGGCTGGCGCCTGAAGTCTGTGCACGCGCCGAGCAACGCTGGTCGCTGTCGCCGTTGACCCTGC CGCACCCATTGGTAAGGATACTCATCGGCGAGCAGATCTATCGCGCCTGGACCGTGCTGTCCGGGCATCCTTATCACAAATGAGCCTGTAAGCCCGCCCG
DNA Sequence for Gene
>PVLB_22305
ATGTCGCAGCCGATCCGTCTCAAGGACCACGAGAAAGACGCCCGCCTGGTGCGCAACCGCGTCGTGGTCGGCGCGGTTGCGATCATGTTGCTCATCTGCG TGCTGATCGCGCGACTGTACTACCTGCAGATCATCCAGTACGACTATCACTCGACGTTGTCCGAGAACAACCGGGTGCATGTCCAGCCCATCCCGCCAAC GCGGGGGCTGATCTTCGACCGCAATGGCGTGATCGTCGCCGACAACCGGCCCAGCTTTAGCCTGTCCATGACCCGGGAACGTGCGGGTAACTGGCAGGAA GTGCTGGATACCATCGTCGAAGTGCTGGAATTGACGCCCGACGATCGCGCGCTGTTCGAGAAGCGCATGCGCCAGGGTCGCAGGCCGTTCGAGCCGGTGC CGATCCTGTTCGAGCTGAACGAAGAGCAGATCGCTCGCGTGGCGGTCAACCAGTTCCGCCTGCCTGGCGTGGAAGTGGTTGCGCAGCTGGTGCGCCACTA CCCGCAAGGTGCGCACTTCGCCCACTCGGTCGGCTATGTCGGGCGCATCAACGAGAAAGAGCTCAAGTCCCTCGACCCGGTGAACTACAGCGGTACCCAC CACATCGGCAAGACCGGCATCGAGCGCTTCTACGAAGCCGAGCTGCATGGCCAGGTAGGTTACGAGGAAGTCGAGACCAACGCCCGTGGCCGTGTGCTGC GGGTGCTCAAGCGCACCGACCCGAAACCGGGCAAGGACATTGTCCTGAGCCTGGATATCAAGCTGCAGGAGGCTGCCGAGGCAGCGCTGGGTGGCCGGCG TGGCGCGGTGGTCGCGCTTGACCCGCGCACCGGCGAGGTGCTGGCGATGGTCAGCCAGCCAAGCTTCGATCCGAATCTGTTCGTCACCGGCATCAGTTTC AAGGCCTATGCCGAGCTGCGTGACTCGATCGACCGACCACTGTTCAACCGCGTGCTGCGCGGTTTGTATCCGCCTGGCTCGACCATCAAGCCTGCCGTGG CCATCGCCGGCCTCGACAGTGGCGTGGTCAACGCCAGCAGCCGGGTGTTCGACCCGGGTTACTACCAGTTGCCCAACTACGACCACAAGTACCGCAACTG GAACCGCACCGGCGATGGCTGGGTCGACCTGGATACCGCCATCATGCGTTCCAACGACACCTACTTCTACGATCTTGCCCACAAGATGGGCATCGACCGG CTGTCGAGCTACATGAATAAGTTCGGTATCGGGCAGAAGGTCTCCCTCGACATGTTCGAGGAATCGGCCGGCCTGATGCCGTCCCGCGAGTGGAAACGCG CCACCCGTCGCCAGGCCTGGTTCCCCGGTGAGACGCTGATCCTGGGTATTGGCCAGGGCTACATGCAGGCCACGCCGCTGCAGCTGGCGCAGGCCACCGC GCTGATCGCCAACAAGGGCGTGTGGAACCGTCCGCACCTGGCCAAGACCATCGAAGGTCAACCCCCGGTGGACGACAACCCCATGGAGAACATCGTCCTG CGTGACAAGTCCGATTGGGCCAAGGTCACCCATGGCATGGAACAAGTGATGCACAACGCCCGAGGTACAGCACGCAAGGCTGCCCTGGGTGCCCAGTATC GGATTGCCGGCAAGAGCGGTACCGCGCAGGTGGTAGCGATCAAGCAAGGCGAGAAGTACGACCGCAACAAACTGCAGGAGCGCCATCGCGACCACGCGCT GTTCGTTGCCTTCGCCCCGGCTGACGATCCGAAGATCGTGGTCTCGGTGATGGTCGAGAACGGTGAATCCGGCTCTGGTGTCGCCGCCCCGGTGGTGCGT CAGGTCATGGACGCCTGGCTGCTCGACGAAAACGGCCGGCTCAAGCCTGAGTTCGCGCCTGCCACCGTTGCCCAGGAAACGGCTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAACAATTTCGATCGCATGCTCTCCAGCGAGGACGTGATGCGTCGACGCGCCAGCTTCCTGCAGCGCATCCACGTCGACGGCCCCTTGCTGGTCATCCT GCTGACCCTCGCGGCCGGCAGCCTGTTCGTCCTCTATTCGGCCAGTGGCAAGAACTGGGACCTGCTGCTCAAGCAGGCCAGCTCGTTCGGCATCGGTCTG GTGTCGATGTTCATCATCGCCCAGCTCGAGCCACGCTTCATGGCGCGTTGGGTTCCGCTGGCCTACCTGGCCGGGGTGTTCCTGTTGATCGTGGTGGACG TCATGGGCCATAACGCCATGGGCGCTACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCGTCAGAGTTCATGAAGATCATCATGCCGGCGAC CATCGCCTGGTACCTGTCCAAGCGCACCTTGCCGCCACACCTCAAGCATGTGGCCATCAGCCTGGTGCTGATCGGTGTGCCGTTCATACTCATCGTGCGC
Amino Acid Sequence
>penicillin-binding protein 2
MSQPIRLKDHEKDARLVRNRVVVGAVAIMLLICVLIARLYYLQIIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQE VLDTIVEVLELTPDDRALFEKRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGRINEKELKSLDPVNYSGTH HIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGISF KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLPNYDHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKMGIDR LSSYMNKFGIGQKVSLDMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHLAKTIEGQPPVDDNPMENIVL RDKSDWAKVTHGMEQVMHNARGTARKAALGAQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPADDPKIVVSVMVENGESGSGVAAPVVR QVMDAWLLDENGRLKPEFAPATVAQETAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site