Pseudomonas sp. VLB120, PVLB_06680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_06680
Name
Replicon chromosome
Genomic location 1510744 - 1511076 (+ strand)

Cross-References

RefSeq YP_008762266.1
GI 557222051
Entrez 17495925
INSDC AGZ34139.1
NCBI Locus Tag PVLB_06680
UniParc UPI0003C08424
UniProtKB Acc U5VBI4
UniProtKB ID U5VBI4_9PSED
UniRef100 UniRef100_U5VBI4
UniRef50 UniRef50_Q3K8X6
UniRef90 UniRef90_U5VBI4

Product

Feature Type CDS
Coding Frame 1
Product Name
competence protein ComEA
Synonyms
Evidence for Translation
Charge (pH 7) -0.01
Kyte-Doolittle Hydrophobicity Value 0.122
Molecular Weight (kDa) 11.7
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 265 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002460 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_06680

Human Homologs

References

No references are associated with this feature.