This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 282 GCF_002312115.1
latest
34 Contig 5980 (75) SAMN06547050 sputum Canada: Montreal Universite Laval
Strain Details
Pseudomonas aeruginosa 2856 GCF_028403965.1
latest
- Complete Genome 6579 (66) SAMN32874240 missing tracheal aspirate France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2857 GCF_028404045.1
latest
- Complete Genome 6653 (62) SAMN32874241 missing sputum France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2858 GCF_028404005.1
latest
- Complete Genome 6447 (67) SAMN32874242 missing urine France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2866 GCF_028404065.1
latest
- Complete Genome 6537 (66) SAMN32874243 missing Catheter France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2867 GCF_028403985.1
latest
- Complete Genome 6559 (66) SAMN32874244 missing bone France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2868 GCF_028404085.1
latest
- Complete Genome 6793 (68) SAMN32874245 missing tracheal aspirate France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 286S270711BSL_PA1 GCF_004374705.1
latest
- Contig 6496 (176) SAMN10478170 human cystic fibrosis sputum Canada: Montreal 245 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 2872 GCF_028404125.1
latest
- Chromosome 6638 (60) SAMN32874246 missing Stools France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2875 GCF_028551535.1
latest
- Chromosome 6928 (74) SAMN32874247 missing Rectal screening France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2879 GCF_028367665.1
latest
- Contig 6793 (108) SAMN32874248 missing urine France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2880 GCF_028404025.1
latest
- Complete Genome 6637 (66) SAMN32874249 missing sputum France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 2881 GCF_028404105.1
latest
- Complete Genome 6716 (66) SAMN32874250 missing urine France 111 (paeruginosa) Technical university of Denmark
Strain Details
Pseudomonas aeruginosa 29 GCF_004351105.1
latest
- Scaffold 5995 (2407) SAMN10743682 infection hospital Italy: Trento University of Trento
Strain Details
Pseudomonas aeruginosa 293S080611BSL_PA1 GCF_004374685.1
latest
- Contig 5849 (83) SAMN10478171 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 293S080611BSL_PA2 GCF_004374405.1
latest
- Scaffold 5941 (114) SAMN10478172 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 294-4 GCF_030326375.1
latest
- Contig 6386 (32) SAMN15324865 intestine China 1710 (paeruginosa) City University of Hong Kong
Strain Details
Pseudomonas aeruginosa 295s071211BSL_PA1 GCF_004374415.1
latest
- Scaffold 5932 (124) SAMN10478173 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 295s071211BSL_PA2 GCF_004374365.1
latest
- Contig 6515 (86) SAMN10478174 human cystic fibrosis sputum Canada: Montreal 17 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 297 GCF_002312755.1
latest
62 Contig 6228 (126) SAMN06547019 infected lung Canada: Saint-Pie-de-Bagot 853 (paeruginosa) Universite Laval
Strain Details