Pseudomonas aeruginosa 2880

Strain Overview
Organism Name Pseudomonas aeruginosa 2880
Species Pseudomonas aeruginosa
Strain 2880
Description/Title
Annotated Genes 6637
Partial Genes 66
Host Information
Host Species Disease missing
Geographic Location
Location Name France
Isolation Source sputum
Latitude/Longitude Missing
Sample Provider
Name Mikkel Anbo
E-mail mikkan@dtu.dk
Institution Technical university of Denmark
Date Collected Missing

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 111
aroE
5		 mutL
4		 guaA
5		 trpE
3		 nuoD
4		 ppsA
4		 acsA
17
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_028404025.1
Assembly Status latest
Scaffolds 1
Contigs
Contig N50 7153626
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN32874249
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa strain 2880 chromosome, complete genome

Annotated Features

Feature Count
gene 6637
CDS 6565
pseudo 105
tRNA 66
rRNA 12
ncRNA 4
tmRNA 1

Replicons

Name Length GC
Pseudomonas aeruginosa strain 2880 chromosome, complete genome 7153626 bp 65.7%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF