Pseudomonas aeruginosa 2875

Strain Overview
Organism Name Pseudomonas aeruginosa 2875
Species Pseudomonas aeruginosa
Strain 2875
Description/Title
Annotated Genes 6928
Partial Genes 74
Host Information
Host Species Disease missing
Geographic Location
Location Name France
Isolation Source Rectal screening
Latitude/Longitude Missing
Sample Provider
Name Mikkel Anbo
E-mail mikkan@dtu.dk
Institution Technical university of Denmark
Date Collected Missing

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 111
aroE
5		 mutL
4		 acsA
17		 nuoD
4		 trpE
3		 ppsA
4		 guaA
5
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_028551535.1
Assembly Status latest
Scaffolds 3
Contigs
Contig N50 7149526
Assembly Level Chromosome
Percent GC
Cross-References
NCBI BioSample Accession SAMN32874247
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa strain 2875 chromosome, complete genome
Pseudomonas aeruginosa strain 2875 plasmid unnamed map unlocalized
Pseudomonas aeruginosa strain 2875 plasmid unnamed map unlocalized

Annotated Features

Feature Count
gene 6928
CDS 6855
pseudo 115
tRNA 65
rRNA 12
ncRNA 4
tmRNA 1

Replicons

Name Length GC
Pseudomonas aeruginosa strain 2875 chromosome, complete genome 7149526 bp 65.7%
Replicon details
Pseudomonas aeruginosa strain 2875 plasmid unnamed map unlocalized 196589 bp 59.2%
Replicon details
Pseudomonas aeruginosa strain 2875 plasmid unnamed map unlocalized 49027 bp 61%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF