This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 14650 GCF_001414085.1
latest
82 Scaffold 5754 (44) SAMN04128839 human Pseudomonas aeruginosa sputum Canada:Alberta 192 (paeruginosa) Oklahoma State Universtiy
Strain Details
Pseudomonas aeruginosa 14651 GCF_001414155.1
latest
110 Scaffold 6043 (54) SAMN04129507 human Pseudomonas aeruginosa sputum Canada:Alberta 179 (paeruginosa) Oklahoma State Universtiy
Strain Details
Pseudomonas aeruginosa 14672 GCF_001414165.1
latest
76 Scaffold 5742 (42) SAMN04129521 human Pseudomonas aeruginosa sputum Canada: Alberta 192 (paeruginosa) Oklahoma State Universtiy
Strain Details
Pseudomonas aeruginosa 14673 GCF_001414175.1
latest
71 Scaffold 5746 (28) SAMN04129522 human Pseudomonas aeruginosa sputum Canada: Alberta 192 (paeruginosa) Oklahoma State Universtiy
Strain Details
Pseudomonas aeruginosa 1472 GCF_003863675.1
latest
- Contig 6607 (436) SAMN10484664 human cystic fibrosis cystic fibrosis patient United Kingdom: Scotland, Royal Infirmary, Edinburgh 348 (paeruginosa) University of Aberdeen
Strain Details
Pseudomonas aeruginosa 148 - Assembly GCF_000647595.2 GCF_000647595.2
latest
126 Contig 6174 (161) SAMN02732279 gastric juice Mexico: Cancun Universidad Nacional Autonoma de Mexico, Instituto de Investigaciones Biomedicas
Universidad Nacional Autonoma de Mexico
Strain Details
Pseudomonas aeruginosa 149 GCF_004350115.1
latest
- Contig 6554 (188) SAMN10743793 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 14_3192 GCF_028435865.1
latest
- Contig 6587 (270) SAMN18869627 Cystic Fibrosis Bronchoalveolar lavage fluid Spain: Santander 175 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 15 GCF_004370015.1
latest
- Contig 6738 (148) SAMN10478404 human cystic fibrosis sputum Canada: Chicoutimi 709 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 150 GCF_004350095.1
latest
- Contig 6552 (184) SAMN10743794 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 151 Assistante GCF_002312145.1
latest
41 Contig 6349 (93) SAMN06547047 Dental unit waterline Canada: Montreal Universite Laval
Strain Details
Pseudomonas aeruginosa 1510 GCF_003863825.1
latest
- Contig 5638 (124) SAMN10484665 human cystic fibrosis cystic fibrosis patient United Kingdom: Scotland, Queen Elizabeth University Hospital Glasgow 584 (paeruginosa) University of Aberdeen
Strain Details
Pseudomonas aeruginosa 152 GCF_004350085.1
latest
- Scaffold 6059 (581) SAMN10743795 infection hospital Italy: Trento 253 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 152504sp2 GCF_003840095.1
latest
- Contig 6249 (111) SAMN07423902 human pneumonia pneumonia patient sputum Portugal 560 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 152609 GCF_013284945.1
latest
- Scaffold 6468 (179) SAMN15010102 unknown Bones France: Paris 233 (paeruginosa) University Hospital of Besancon
Strain Details
Pseudomonas aeruginosa 152962 GCF_016811975.1
latest
- Complete Genome 6388 (61) SAMN17575725 Sepsis blood France: Paris 654 (paeruginosa) French National Center for Antibiotics Resistance
Strain Details
Pseudomonas aeruginosa 153 GCF_004350055.1
latest
- Contig 6763 (504) SAMN10743796 infection hospital Italy: Trento 179 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 154 GCF_004350025.1
latest
- Contig 6592 (218) SAMN10743797 infection hospital Italy: Trento 155 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 155 GCF_004350485.1
latest
- Contig 6441 (229) SAMN10743798 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 156 GCF_004350455.1
latest
- Contig 5981 (213) SAMN10743799 infection hospital Italy: Trento University of Trento
Strain Details