Pseudomonas aeruginosa 152962

Strain Overview
Organism Name Pseudomonas aeruginosa 152962
Species Pseudomonas aeruginosa
Strain 152962
Description/Title
Annotated Genes 6388
Partial Genes 61
Host Information
Host Species Disease Sepsis
Geographic Location
Location Name France: Paris
Isolation Source blood
Latitude/Longitude 48.85 N 2.34 E
Sample Provider
Name Pauline Triponney
E-mail ptriponney@chu-besancon.fr
Institution French National Center for Antibiotics Resistance
Date Collected 2015-07-01

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 654
nuoD
4		 trpE
26		 mutL
3		 guaA
26		 ppsA
4		 aroE
5		 acsA
17
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_016811975.1
Assembly Status latest
Scaffolds 1
Contigs
Contig N50 6950174
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN17575725
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa strain 152962 chromosome, complete genome

Annotated Features

Feature Count
gene 6388
CDS 6315
pseudo 102
tRNA 64
rRNA 12
ncRNA 3
tmRNA 1

Replicons

Name Length GC
Pseudomonas aeruginosa strain 152962 chromosome, complete genome 6950174 bp 66%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF