Pseudomonas putida LS46, PPUTLS46_025531
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida LS46 - Assembly GCF_000294445.2
GCF_000294445.2|latest |
| Locus Tag |
PPUTLS46_025531
|
| NCBI Locus Tag | PPUTLS46_RS25355 |
| Name |
|
| Replicon | Contig19 |
| Genomic location | 3 - 2873 (+ strand) |
Cross-References
| RefSeq | WP_003255939.1 |
| GI | 489348835 |
| NCBI Locus Tag | PPUTLS46_RS25355 |
| NCBI Old Locus Tag | PPUTLS46_025531 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
sugar-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.68 |
| Kyte-Doolittle Hydrophobicity Value | -0.781 |
| Molecular Weight (kDa) | 109.6 |
| Isoelectric Point (pI) | 6.49 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000092 (1670 members) |
| Putative Inparalogs |
4 predicted inparalogs YD repeat-containing protein (PPUTLS46_025569) 98.3% identity rhs-like protein (PPUTLS46_025536) 95.9% identity YD repeat-containing protein (PPUTLS46_003697) 97.5% identity YD repeat-containing protein (PPUTLS46_003712) 96.0% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUTLS46_025531
Search term: sugar-binding protein
|
Human Homologs
References
No references are associated with this feature.