Pseudomonas putida LS46, PPUTLS46_025531

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida LS46 Contig19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TG
DNA Sequence for Gene
>PPUTLS46_025531
ATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGTGTGGTCGAACACTGGACCAGCGACGGCG AGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAACGCCGACCACCGCGT GGTCGCCAGCCGCGACTACGGTGGCGAACGCTATGCCATCGAACTGGACGAGCAGGGCAACATGGTCGGCCTGACCTTGCCGGACGGTAACCGCCTGCAA TTCAAGTACGACGAATTCTCCCGCTTGCTCGAAGAAACCGACCCGCTGGGCCGCAAGACCGTTTACGAGTATCACCACCTGACCACACTGGTGACCCAGG TCAGCTACCCGGACGGCAGCACCTGGCGAGCGCGCTACGACGACAAGGGCAACCTGCTCGCCGAATTCGATGCCCTCGGCCAGATGACCGAGTACCTGAA CAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAGCGCTACCAGGACTGC TCGGGCAAGAGTACGTACTACCGCTATGACGAACGCCAGCACCTGGTGGCGGTGACCGATGCGCTGAACCAGACCACCACGCTGGCGCGCAAGCCCGACG GCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGAC CACTCGCCTGATGCGCACCGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATTCGCCTGACC GCGCTGGTCAACGAGAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGGCTGAGCGAAGAAGTGCGGGTGGATAACCTGACCCGGCGTTTCA GCTACGACGTCGGTGGCCATCTCACACGACTGGATGAGATTGGCTATGGCGAGAATGCCGAACGGCCGGAGCGCCATACGCTGTTCGAGCGTGATGCCAT TGGGCGTTTGGTTGCCAAGATCAACCGTGATGCGAGCCAGACATTCGCATACGACGACGGTGACCGGTTGCTGAGCATCGAGCGGCAACCGACCGGGATC GGCAAGCAGCTTGGGATCACGGAAGAAAAGCTGGAATACACCTACGATCTGCTCGGCCGTCTGACCAAAGAAATCACCCCTGACGGCACGCTTGGCTACG AGTACGACCCGCTCAGCAACCTGACCACGCTGACCCTGCCGGATGGGCGTAAGGTCAATCACCTGTATTACGGCAGTGGCCACCTGCACCAGCTGAACCT GGATGGTCAGGTGATCAGCGACATGGAGCGCGATGACCTGCACCGCGAGGTGTACCGGACCCAGGGCAAGCTCACCAGTTGCTTCGGTTATGACGCCATG GGGCGCAAGGCCTGGCAGTTTGCCTCGACCTTGCCCGCCGACAAGCTCTCGCAAGTGCACAACACCGGCATCAATACCTCGTTGCTGGTCGAGCATGCCT ACAACCCGATCCACCGCCGTTATCAGTACGACCCGGCCGGTGAACTGGTGCGTACCCTCGACAAGCTACGCGGCGAGATCAAATACGAATACGAAGCCAA TGGCCAGTTGCGCAGTCGCGATACCGGCTCGTTGATCGGCAGCGAGGAGTTCCGCTACGACCCGGCAGCCAACCGCCTGGACTTCAATGCGCGGCAGTTC GACAAGGTCAAGGACAACCGGATCAAACAGTGGCGGGATCAGGAGTACCGCTACGACCCGTGGGGCAACCAGATCGAGAAGCGCTCGGGGCACAGCAAGC TGCAGCACTTCAGCTATGACTGCGAGAACCGGCTGGTGCGGGCGGAGACGTTGGTCAATGGCAAGCTGGAAAGCCAAGGCGAGTATCGTTACGACAGCTT GGGGAGGCGAATAGCCAAGCAGGCTGAAATCAATGGCGAGGTCGAGCAGAAGCGCTTTCTCTGGCAAGGCTTGCGAATGCTGCGTGAGGAGACGCCTGGG CAGAGCATCCTGTACCTGTACGAGCCGGGTAGCTATGCGCCATTGGCGCGGGTTGATCAGGTTGAAGGGGAAGGGCAGAAGGTCTATTACTTCCATACGG ACCAGATTGGTACGCCGCTGGAGCTGACGGACAGTGACGGCAAAATCGTTTGGCAGGCGACGTATCGTTCTTGGGGGGAGATAGAGCAGCTGACGGTCAA CCAAGTTATGCAGCACATGCGCTTTCAAGGTCAATACTGTGATCTTGAGACAGGGCTGCATTACAATGCTTATAGATATTATGATCCACAAGTTGGCCGT TTCGTAACGCAAGACCCGTTGAGTATCGACGGCGGAATGAATCTCTATGGGTATGCTCTAAATCCGATCCTATGGTTGGATCCACTTGGGCTATCCTGCG GGTCCGATGCGAAAAAACTTGCAGACAGCCTCGGTAGTAAACCAGTAGGTGGAGGGCAGTATGACGCGCATCACATCATAATGTCCAACTCAAAAGACGC CAGAATGATAGCTTTGAGAAAGCAAATGAAAGAACTGGGGATCGATATCAATAACAGGAAAAACGGTATCTGGTTGCCAAATACAGAATCTGCTAGAGTT CCCGGAACACTAGCGACGCCACACAAGGGGGCTGGCATACATGGAAATGCCTACAAGCAACATGTGTATGATACATTGGCTGGCAGAACAACTAAGAAAG ATTTTTTGAGTGGGCTCGCAGAGCTCAAAGAGCAATTAAATAGCGGTAAAACTTTTGCTGTTAGGAGGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGTGATTCCTGATAAATTTAAAGGTTTGGTTGAGATTTTAAAATCTAAGCTTGATATGGATCTTTCTGAAAGTGCGGCCGTGCAGCGCATAATAAGTGA AGAAGTAAAATGGTCTAGGGGGCCAAGTTTTTCTATATTGCCTTATGGTCTGGAATTAGCCGGGGTGACTCCGTCTCCCATTCTCAACTCTGAGCCAAAG AATAAAAAAAATTGCTTTAAGTTCTATTGCTCTGAGCCGTATGGTTTTTATAGGTCTGATATATATGGTGTGGACGCGACAGTGATAGAAACTGAGATAT ATCAGATGGAGGGGCAATCTACTTATTCAATCCGTTTTGACGATGACGGAGAGGCTATTAGGGCGTCTGGGGTTATATTTGAGAATGGAGTACCAAATAT ATCATGCCGCCTGGAGAACGATGGTGAATATTGGTGCTATGAGTATAGGTGTGAAGCAGCAAGGATAACATCAATGATTGTATATGCTAGCAATAGCGCT
Amino Acid Sequence
>sugar-binding protein
MVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHYHFRYDLDSRTSWATDVLGRELEVQYNADHRVVASRDYGGERYAIELDEQGNMVGLTLPDGNRLQ FKYDEFSRLLEETDPLGRKTVYEYHHLTTLVTQVSYPDGSTWRARYDDKGNLLAEFDALGQMTEYLNSDDGLPHTIIDATYKSKYLWWNTLAQVERYQDC SGKSTYYRYDERQHLVAVTDALNQTTTLARKPDGEVLRISHPDGTTESFTYNVYGQVLSHTDGKGQTTRLMRTARGLPSSRQDAKGQRVRYEYDKAIRLT ALVNENNATYSFAYDASDRLSEEVRVDNLTRRFSYDVGGHLTRLDEIGYGENAERPERHTLFERDAIGRLVAKINRDASQTFAYDDGDRLLSIERQPTGI GKQLGITEEKLEYTYDLLGRLTKEITPDGTLGYEYDPLSNLTTLTLPDGRKVNHLYYGSGHLHQLNLDGQVISDMERDDLHREVYRTQGKLTSCFGYDAM GRKAWQFASTLPADKLSQVHNTGINTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTGSLIGSEEFRYDPAANRLDFNARQF DKVKDNRIKQWRDQEYRYDPWGNQIEKRSGHSKLQHFSYDCENRLVRAETLVNGKLESQGEYRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLREETPG QSILYLYEPGSYAPLARVDQVEGEGQKVYYFHTDQIGTPLELTDSDGKIVWQATYRSWGEIEQLTVNQVMQHMRFQGQYCDLETGLHYNAYRYYDPQVGR FVTQDPLSIDGGMNLYGYALNPILWLDPLGLSCGSDAKKLADSLGSKPVGGGQYDAHHIIMSNSKDARMIALRKQMKELGIDINNRKNGIWLPNTESARV PGTLATPHKGAGIHGNAYKQHVYDTLAGRTTKKDFLSGLAELKEQLNSGKTFAVRR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site