Pseudomonas viridiflava LMCA8, RT94_RS24870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS24870
|
| Name |
Synonym: RT94_24855 |
| Replicon | contig_63 |
| Genomic location | 69536 - 71611 (- strand) |
Cross-References
| RefSeq | WP_043306569.1 |
| GI | 759587968 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type IV secretion protein Rhs
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.65 |
| Kyte-Doolittle Hydrophobicity Value | -0.492 |
| Molecular Weight (kDa) | 77.0 |
| Isoelectric Point (pI) | 6.81 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000090 (3342 members) |
| Putative Inparalogs |
3 predicted inparalogs type IV secretion protein Rhs (RT94_RS19930) 92.7% identity type IV secretion protein Rhs (RT94_RS06400) 97.7% identity type IV secretion protein Rhs (RT94_RS19930) 92.7% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS24870
Search term: type IV secretion protein Rhs
|
Human Homologs
References
No references are associated with this feature.