Pseudomonas viridiflava LMCA8, RT94_RS19930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS19930
|
| Name |
Synonym: RT94_19925 |
| Replicon | contig_45 |
| Genomic location | 211283
- 212664
(- strand)
Partial sequence -> 5' end. |
Cross-References
| RefSeq | WP_043305916.1 |
| GI | 759587297 |
Product
| Feature Type | CDS |
| Coding Frame | 3 |
| Product Name |
type IV secretion protein Rhs
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.29 |
| Kyte-Doolittle Hydrophobicity Value | -0.600 |
| Molecular Weight (kDa) | 50.3 |
| Isoelectric Point (pI) | 5.99 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG214444 (2 members) |
| Putative Inparalogs |
2 predicted inparalogs type IV secretion protein Rhs (RT94_RS24870) 92.7% identity type IV secretion protein Rhs (RT94_RS24870) 92.7% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS19930
Search term: type IV secretion protein Rhs
|
Human Homologs
References
No references are associated with this feature.