Pseudomonas viridiflava LMCA8, RT94_RS08420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas viridiflava LMCA8
GCF_000834695.1|latest |
| Locus Tag |
RT94_RS08420
|
| Name |
Synonym: RT94_08415 |
| Replicon | contig_15 |
| Genomic location | 105820 - 106896 (- strand) |
Cross-References
| RefSeq | WP_004884114.1 |
| GI | 491022417 |
| EC Number | 5.3.1.23 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
methylthioribose-1-phosphate isomerase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.61 |
| Kyte-Doolittle Hydrophobicity Value | 0.008 |
| Molecular Weight (kDa) | 38.9 |
| Isoelectric Point (pI) | 5.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002446 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RT94_RS08420
Search term: methylthioribose-1-phosphate isomerase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]
E-value:
6.3e-65
Percent Identity:
43.5
|
References
No references are associated with this feature.