Pseudomonas viridiflava LMCA8, RT94_RS08420

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0044237	cellular metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01008	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0044249	cellular biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00524	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01008	Initiation factor 2 subunit family	IPR000649	Initiation factor 2B-related	53	341	1.9E-73
FunFam	G3DSA:3.40.50.10470:FF:000006	Methylthioribose-1-phosphate isomerase	-	-	158	354	3.9E-91
NCBIfam	TIGR00512	JCVI: S-methyl-5-thioribose-1-phosphate isomerase	IPR005251	Methylthioribose-1-phosphate isomerase	12	341	0.0
Hamap	MF_01678	Putative methylthioribose-1-phosphate isomerase [mtnA].	IPR005251	Methylthioribose-1-phosphate isomerase	11	351	72.069145
SUPERFAMILY	SSF100950	NagB/RpiA/CoA transferase-like	IPR037171	NagB/RpiA transferase-like	9	347	1.73E-111
NCBIfam	TIGR00524	JCVI: S-methyl-5-thioribose-1-phosphate isomerase	IPR011559	Initiation factor 2B alpha/beta/delta	43	341	8.1E-105
FunFam	G3DSA:1.20.120.420:FF:000008	Methylthioribose-1-phosphate isomerase	-	-	10	158	1.7E-66
Gene3D	G3DSA:3.40.50.10470	-	IPR042529	Initiation factor 2B-like, C-terminal	159	357	2.0E-75
Gene3D	G3DSA:1.20.120.420	-	IPR027363	Methylthioribose-1-phosphate isomerase, N-terminal	10	158	3.4E-41
PANTHER	PTHR43475	METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE	-	-	8	351	1.1E-116

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.