Pseudomonas syringae pv. tomato NYS-T1, NB04_RS12070 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. tomato NYS-T1
GCF_000765305.1|latest |
| Locus Tag |
NB04_RS12070
|
| Name |
gyrB
Synonym: NB04_12065 |
| Replicon | Contig8 |
| Genomic location | 44749 - 47166 (- strand) |
Cross-References
| RefSeq | WP_005768224.1 |
| GI | 492167102 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA gyrase subunit B
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.00 |
| Kyte-Doolittle Hydrophobicity Value | -0.382 |
| Molecular Weight (kDa) | 90.1 |
| Isoelectric Point (pI) | 5.93 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000004 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NB04_RS12070
Search term: gyrB
Search term: DNA gyrase subunit B
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value:
9.3e-32
Percent Identity:
25.1
|
References
No references are associated with this feature.