Pseudomonas syringae pv. syringae B301D, PSYRB_RS25385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B301D
GCF_000988485.1|latest
Locus Tag
PSYRB_RS25385
Name
Synonym: PsyrB_25955
Replicon chromosome
Genomic location 5876597 - 5879200 (+ strand)

Cross-References

RefSeq WP_032657761.1
GI 695731242

Product

Feature Type CDS
Coding Frame 1
Product Name
ATPase AAA
Synonyms
Evidence for Translation
Charge (pH 7) -19.50
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 95.2
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1168 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSYRB_RS25385
Search term: ATPase AAA

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 7.1e-38
Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 7.1e-38
Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 7.1e-38
Percent Identity: 34.6

References

No references are associated with this feature.