Pseudomonas syringae pv. syringae B301D, PSYRB_RS25385
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCAGCTACTTCTCGGGGATGTTCGCGCAGAAGCCGCGCAACGCCCTGAACCTTGAGGTCATGCTGAGTTTTTACTTCTCGCTGCCGTTCAAGATCCAGC AGTTCGCCGGACGCTGGCTGAAGCTCGACAGCAGCCAGTGCACGCAGTTGGGCCGCAAGAATGCCGTGCTGGGGCAAAGCGCCGTGGCCGGCAATCGCGT CTGGGATTATCAGTCGTGTGTACGTATCGAAATGGGCCCTCTGGAACTGGCTGAATACCAGCGCTTTCAGCCGGGCACCGAGGATTACCAGAAGCTTGTT GAACTGGTGCGTTTTTACATCGGTGCCGAACTGGACTTCCAGATTGCGCCGAAGCTCAAGCGCGAAGCTGTACCCGTGGCCCGCCTGGGTCGCCAAGGCA ATGTATCGCTGGGCTGGCTTGGCTGGCTCAAACGCCCCGGTGTCGACGTGGAGCCTTCCCGTTGCGCCGTTTTCCATATTCCTTTTGATGGGGTCTCCCT
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| DNA Sequence for Gene |
>PSYRB_RS25385
GTGAACCTGAAGTCCCTGTTCGCCAAGCTGAACGAAACGAGCCGCACTGCCACTGAAAGCGCTGCTGCGCTGTGCCTGTCGGAGAACCATTACGACGTTG AAGTCGAGCACTTGCTGCTGCAACTGCTCGATAACAACGACAACGATCTGCCAGTGATCCTGCGCCACTACGATGTGGTGCCTGATCGCCTGCAGGCACA GTTGGTCACTGCGCTGGGGACGTTCAAAAAAGGCAACACGCGGACGCCTGCGCTCTCGCCGCACATCACGCGCATGATCGAGCAGGCCTGGGTGCTGGCA TCGATCGAGTTCGGTCAGTCACAGATCCGTACCGGCCATCTTGTGCAGGCCTTGCTGGATGACGATGCACTGCGTCGCGTGGTCATCGGCTCGGCGCCGG AGCTGGAGAAGATCAACGCTGACGACCTGCGCCTGAACATGAGCGCGCTGGTCGAGGGCAGCCCCGAGACCAAGCTGAGCAAGCCACTGGCGAACGCCGA CGCCAGCACGGGCGCCACCACCAAAGGCAACGGCAAGACGCCAGCCCTGGACCAGTACACCGTCAACCTGACCCAGGGCGCTCGCGATGGTCGCATTGAC CCGGTGCTGGGACGCGAATTCGAAGTGCGGCAGATGGTCGACATCCTGACCCGCCGCCGCCAGAACAACCCGATCCTGACCGGTGAAGCCGGCGTCGGTA AAACAGCCGTGGTGGAAGGCCTCGCACTGCGCATTGTGCAGGGCGACGTACCGTCGGTGCTCAAGGGCGTCGCCATTCACACGCTGGATCTGGGGCTGTT GCAGGCCGGTGCCGGGGTCAAGGGCGAGTTCGAAAACCGCCTCAAGTCGGTCATCGAAGAAACCAAACGCAGCCTGCACCCGATCATTCTGTTTATCGAT GAAGCCCACACGCTGATCGGTTCGGGCGGGCAAGCCGGGCAGAACGATGCCGCCAACCTGCTCAAGCCTGCCTTGGCACGCGGCGAGCTGCGCACCATCG CCGCCACCACCTGGGCCGAGTACAAAAAGTATTTCGAGAAAGATGCCGCACTGGCTCGACGCTTCCAGGTCGTGAAAGTCGAAGAGCCTGACGAAGACAA GGCCATCCACATGCTTCGCGGGTTGCTGGCGAAGATGCAGGAACACCACAAGGTCACGGTGATGGATGAAGCGCTGGTGCAGGCCGTGCGCTTGTCCAAT CGTTACATCACTGGCCGCCAGCTGCCGGACAAGGCAGTCAGCGTGCTCGACACCGCTTGCGCACGTGTCGCCCTGGGCCAGTCGGCACAGCCGGGAGCGC TGGAGGACTGCAAGCGTCACATCGACAACCTGAACGCAGAAATCACCGTACTGGAGCAGGAAACCGCCAAGGGCAGCGACCACGCTCGCCGTCTGACGGC CCTGCACGAAGAGCTGCAGGCCGAACAGGAGACCCGCGAGTCGCTGGAGCAACAGTGGAAGCGCGAGCTGGAACTGGTCGAAAAGCTTGGCGCACTCAGC GTTCCGCAAAGCGGCGAGCCTGATGCCGGGCAGATTGCCGCCGTACGCGCCGAACTGGCCAGCGTGCAGGGCGAGCAACCGCTGGTCCACGCACTGGTCG ATGGCGGCACGATTGGCGAAGTGATTTCCGGCTGGACCGGCATTCCGCTGGGCAAGATGCTGCGCGACGAAATCGACACCGTGCAGAGCCTGCCCGCGCT GCTGGGCGAACGCGTACTGGGTCAGGACCATGCACTCGAAGAAATCGGCAAGCGCATCAAGATTTCCCGTGCCCGCATGGAAGACCCGAACAAGCCGATC GGCGTGTTCCTGCTGCTGGGCCCGAGCGGCGTCGGCAAGACCGAAACGGCACTGGCCCTGGCTGACACGCTGTATGGCGGCGAACGTAACGTCATCACCA TCAACATGTCCGAATACCAGGAAGCCCACACCGTCTCCAGCCTGAAAGGCTCACCGCCTGGCTACGTCGGTTACGGCGAAGGTGGCGTGCTCACCGAAGC CGTACGCCGCAAGCCTTACAGCGTGGTGCTACTCGACGAGGTGGAGAAAGCCCACCCGGATGTGCTCGAGCTGTTTTTCCAGGTCTTCGACAAAGGCGTG CTGGACGATGGCGAAGGTCGCGAGATCAACTTCCGCAATACCGTGATCATCCTCACCTCCAACACCGGTACTGATCGCATCATGCAGTGGTGCCTGAACA CCGAGCAGAAGCCGACCCCCGATGACATCGTGGAAGGCCTGCGCGACGAGCTGAATCTGGTGTTCAAACCGGCCTTCCTGGGTCGCCTGACCATCGTGCC GTATTACCCGGTACAGGACGCGATTCTGGAGCGCATCGTCGGCCTGAAGCTGGAGCGCATTCGCAAGCGTTTCGAGCGCAATCATCAGGCGGTGCTGCGT TACGACGAAGCGCTGATCAAGGCTATCGCGTCGCGCTGCACGGAAGTCGACAGCGGCGCACGCAATATCGACAACATCCTGTCCAAGACCCTCATGCCGG AGCTCGCTCAGCGGGTGCTAGAGCGGATGGCGCAGGACAAGCCGATTCAGAGCCTGACCATCGACCTGGGCAGCGATGGCGACTTCGCTTACACCCTGAC CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGATCACCCCATAGGTAAGACGTAATGAATAAAAGACTTCAAGGCAATTGTTCCTCGAAGCCAGCCTTGGCAAGGTGCCTGGCTGTTCTGGCAATGATG ATGGCTCTGTCCGCCTGCGGCGTGACAGACCGTGTCGCCAAGCGCATGGATGACACCTGGGCTGGCGACATGATGTTCGGTGACAACGAAAAGGTCATCC TGACGACTGACGGCGGCAACCAGCTCAACCCCGACGAGTACGGCAAACCGCTCTCGGTGGTGGTGCGCGTTTATCAACTGTCCTCTCTGGAGCGCTTCGA GTCGATCAACGCCGACACTCTCTGGGAGGATCCGCAAAAGGCTCTGGGCAACACGCTGGTCGAAAGCCGAGAGCTGATTCTGTTGCCTGGCATGGGCCAG ACCGATCAATGGCCGCTGAACCCGAATGCCTCGTATGTGGGCATCGCGGCGTTCTTCCGCACCGACGTCGACAGCCGCTGGAAGGTCGCGTTCGACGCCA
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| Amino Acid Sequence |
>ATPase AAA
MNLKSLFAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVVPDRLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWVLA SIEFGQSQIRTGHLVQALLDDDALRRVVIGSAPELEKINADDLRLNMSALVEGSPETKLSKPLANADASTGATTKGNGKTPALDQYTVNLTQGARDGRID PVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALRIVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFID EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLAKMQEHHKVTVMDEALVQAVRLSN RYITGRQLPDKAVSVLDTACARVALGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSDHARRLTALHEELQAEQETRESLEQQWKRELELVEKLGALS VPQSGEPDAGQIAAVRAELASVQGEQPLVHALVDGGTIGEVISGWTGIPLGKMLRDEIDTVQSLPALLGERVLGQDHALEEIGKRIKISRARMEDPNKPI GVFLLLGPSGVGKTETALALADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGV LDDGEGREINFRNTVIILTSNTGTDRIMQWCLNTEQKPTPDDIVEGLRDELNLVFKPAFLGRLTIVPYYPVQDAILERIVGLKLERIRKRFERNHQAVLR YDEALIKAIASRCTEVDSGARNIDNILSKTLMPELAQRVLERMAQDKPIQSLTIDLGSDGDFAYTLT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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