Pseudomonas sp. DSM 28140, TU87_RS20140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. DSM 28140
GCF_001042975.1|latest |
| Locus Tag |
TU87_RS20140
|
| Name |
Synonym: TU87_20145 |
| Replicon | contig_3 |
| Genomic location | 117859 - 118362 (- strand) |
Cross-References
| RefSeq | WP_048365897.1 |
| GI | 860277103 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.75 |
| Kyte-Doolittle Hydrophobicity Value | -0.391 |
| Molecular Weight (kDa) | 18.3 |
| Isoelectric Point (pI) | 4.85 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000082 (1224 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: TU87_RS20140
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.