Pseudomonas simiae 2-36, LS88_RS03400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas simiae 2-36
GCF_000785125.1|latest |
| Locus Tag |
LS88_RS03400
|
| Name |
|
| Replicon | scaffold1.1 |
| Genomic location | 740137 - 742527 (+ strand) |
Cross-References
| RefSeq | WP_010209184.1 |
| GI | 497895028 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-dependent receptor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.52 |
| Kyte-Doolittle Hydrophobicity Value | -0.372 |
| Molecular Weight (kDa) | 86.3 |
| Isoelectric Point (pI) | 4.95 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003507 (512 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: LS88_RS03400
Search term: TonB-dependent receptor
|
Human Homologs
References
No references are associated with this feature.