Pseudomonas knackmussii B13, PKB_RS09650
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas knackmussii B13
GCF_000689415.1|latest |
| Locus Tag |
PKB_RS09650
|
| Name |
Synonym: PKB_1959 |
| Replicon | chromosome |
| Genomic location | 2008929 - 2009990 (+ strand) |
Cross-References
| RefSeq | WP_043251184.1 |
| GI | 759531111 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
porin
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.20 |
| Kyte-Doolittle Hydrophobicity Value | -0.475 |
| Molecular Weight (kDa) | 37.7 |
| Isoelectric Point (pI) | 5.09 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5U1H | PEPTIDE BINDING PROTEIN | 11/28/16 | Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.5 | X-RAY DIFFRACTION | 94.2 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003618 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PKB_RS09650
Search term: porin
|
Human Homologs
References
No references are associated with this feature.