Pseudomonas knackmussii B13, PKB_RS09650

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005509	calcium ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF103647	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	290	306	1.5E-17
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	159	352	3.3E-35
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	245	267	1.5E-17
FunFam	G3DSA:3.30.1330.60:FF:000005	Outer membrane porin F	-	-	230	349	4.8E-55
Gene3D	G3DSA:2.40.160.20	-	-	-	14	184	3.6E-53
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	245	340	8.0E-24
SUPERFAMILY	SSF56925	OMPA-like	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	38	189	4.45E-16
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	275	290	1.5E-17
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	240	346	8.75401E-49
Pfam	PF05736	OprF membrane domain	IPR008722	Outer membrane porin F, N-terminal	1	187	3.4E-90
SUPERFAMILY	SSF103647	TSP type-3 repeat	IPR028974	TSP type-3 repeat	200	232	5.49E-7
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	230	351	5.4E-41
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	229	345	1.44E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.