Pseudomonas sp. M1, PM1_RS24255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. M1 - Assembly GCF_000317185.3
GCF_000317185.3|latest |
| Locus Tag |
PM1_RS24255
|
| Name |
Synonym: PM1_0224730 |
| Replicon | PM1contig_003 |
| Genomic location | 453685 - 454455 (+ strand) |
Cross-References
| RefSeq | WP_024128761.1 |
| GI | 575529028 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-hydroxy-2-methylbutyryl-CoA dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.83 |
| Kyte-Doolittle Hydrophobicity Value | 0.184 |
| Molecular Weight (kDa) | 26.3 |
| Isoelectric Point (pI) | 6.69 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003017 (954 members) |
| Putative Inparalogs |
1 predicted inparalogs short-chain dehydrogenase/reductase SDR (PM1_RS16040) 60.9% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PM1_RS24255
Search term: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:4800]
E-value:
9.7e-60
Percent Identity:
50.6
|
References
No references are associated with this feature.