Pseudomonas protegens Pf-5, PFL_5997 (algQ)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5997
Name	algQ
Replicon	chromosome
Genomic location	6817595 - 6818053 (- strand)

Cross-References

RefSeq	YP_263055.1
GI	70733281
Entrez	3480368
INSDC	AAY95186.1
NCBI Locus Tag	PFL_5997
UniParc	UPI000054E226
UniProtKB Acc	Q4K3X8
UniProtKB ID	Q4K3X8_PSEF5
UniRef100	UniRef100_Q4K3X8
UniRef50	UniRef50_P15275
UniRef90	UniRef90_Q4K3X8

Product

Feature Type	CDS
Coding Frame	1
Product Name	anti-RNA polymerase sigma 70 factor
Synonyms
Evidence for Translation
Charge (pH 7)	-11.71
Kyte-Doolittle Hydrophobicity Value	-0.261
Molecular Weight (kDa)	17.2
Isoelectric Point (pI)	4.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004836 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5997 Search term: algQ Search term: anti-RNA polymerase sigma 70 factor

Human Homologs

References