Pseudomonas protegens Pf-5, PFL_5997 (algQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCTGCTGGGGGTGGTCACCGCGGGACGCCATGTGCTGTTGCAGAACATTCCCTCCGAACAGTTGCTGGCCTGCCTGCCGGACATGTCCTTCATGCTCCG CCAGTTGTCCTGGTGGCAGGCGTTGAAGCTGACTTTCATGGGCACCTCCGATTGCGCTGAGGTCACCTGGACCCTGCTGGACATGAGCTTGCCTGAGTGG AGCCTGCTGTTTTTCGTGATCATGCTGATCTTTAGCGGCTATCGCCTGTGGCGTCAGCTACGGGGCGCGCGCAAGGCCGTGGCGTTGCCCTGAGTCAGTG TTTGGCAGGAGGGCGGGGATTAAACGCTTGTATGAACTTTATCTCCTGCGTACCTTGATGCTGTAGTCGAGCGGGCATAATCTGGCCCGCACCTGTCACT GGAATTATGTTGCTCGATGCTGTTGTGCCTGACCGGATCCAGAGTCTCCAGAAAGGAGCGGCGGGCAAGCGGCATGACCCATAAGGGAAGAGAGATCACC
DNA Sequence for Gene
>PFL_5997 |algQ
ATGCTCGAAAGTTGTCAGAATGCTCAGGAACGCTGGGGTGGAGTGCATCTGCTGATCGACCGCTGGTTGCAGGAGCGTCACGAACTGGTTCGAGCCTATG ATGCGCTGGGCGCGGAGCCCGAGGCACTGAGTGAGAGCAAGAAGCCGCTGCAGGAATTCTGCGGGATCCTGGTGGACTACGTCTCCGCCGGCCATTTTGA AATCTACGAACAGCTGACCAGCGAAGCCAAGGCGTTTGGCGACAAGCGCGGGCTGGAGTTGGCCGACACCCTCTACCCACGCATCGACGTGATCACCGAA AAGCTTCTGGCGTTCAATGACCTGTGTGACGCCGGCCAGTGCGTGGCGCAGAAGTTCAAGGAACTCGGTGGCCTGCTGCACGAACGCTTCGAGCTGGAAG ACTGTCTGATCGAAGTGCTGCACAACGCCCACAAGCAGGAAGCTGTGGCTCAGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAACAGGAACCTACCAGGAAAAACGGCACGCCTCGGCGTGCCGTTTTTCGTTGTGGCGCTTCAGCCAGCGACACCGAGCAATTCGATGTCGAACACCAGT GGGGTGTAGGGCGCGATCAGGTCCCCGGCGCCTTCGGTGCCATAGGCCTGGTTCGACGGGATTACCAGGCGCCACCGGGCTCCGGTGGGCATCTGCGACA GTGCGCTACGCCAGCCGGCGATCACGCTGTCGAGGCGGAACCATTGCGGCTGCTGGGTCTGATCGAACACGGTGCCGTCTGGCAGGCGCCCGGTGTAGCG CACCTGGACCGAGCCGTTGGGGCTGGCCTTGTTGCCGCTGCCAGGGCTCAACTCGGTCAGCAGGATGCCGTCTTCCAGTTGGCGGACCCCGGGCTTGGCC TTTTCTTCATCGAGAAAGCGCTGTTCGTTTTTCAGCGCGATCTCTGTCTGAGACTTGGCCGACTGTTCGCTGATCTGTGCGTCGTGCTCGGCAAGGATCT
Amino Acid Sequence
>anti-RNA polymerase sigma 70 factor
MLESCQNAQERWGGVHLLIDRWLQERHELVRAYDALGAEPEALSESKKPLQEFCGILVDYVSAGHFEIYEQLTSEAKAFGDKRGLELADTLYPRIDVITE KLLAFNDLCDAGQCVAQKFKELGGLLHERFELEDCLIEVLHNAHKQEAVAQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site