Pseudomonas protegens Pf-5, PFL_5448 (dacA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5448
Name
dacA
Replicon chromosome
Genomic location 6218107 - 6219264 (- strand)

Cross-References

RefSeq YP_262516.1
GI 70732753
EC Number 3.4.16.4
Entrez 3479840
INSDC AAY94658.1
NCBI Locus Tag PFL_5448
UniParc UPI000054E01B
UniProtKB Acc Q4K5G7
UniProtKB ID Q4K5G7_PSEF5
UniRef100 UniRef100_Q4K5G7
UniRef50 UniRef50_Q4K5G7
UniRef90 UniRef90_Q4K5G7

Product

Feature Type CDS
Coding Frame 1
Product Name
D-alanyl-D-alanine carboxypeptidase
Synonyms
Evidence for Translation
Charge (pH 7) -1.65
Kyte-Doolittle Hydrophobicity Value -0.099
Molecular Weight (kDa) 42.2
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 384 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001684 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5448
Search term: dacA

Human Homologs

References

No references are associated with this feature.