Pseudomonas protegens Pf-5, PFL_5448 (dacA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAACAATGGACCCCGCCGCCCCAGCAGCACGCGGCGGCTGTGGTTCCCGTACAAGTGAAAAACACGGCAGCAGCTTCTGGCCAGTATCTGCAGGTGGG CGCCTTCGCCAACCCTGACGCTGCCGAGCTGTTGAGGTCGAAATTGAGTGGCATGGTGAGCGCCCCGGTGTTCATCAGCTCGATCGTCCGCAATCAACAG ACGCTGCATCGGGTCCGCCTGGGGCCATTCGGCACGCCGGGTGAGGCCCAGCAAGCGCAGAACAGCGTACGCCTGGCGAACCTTGGGCAGGCCAGCGTGG TCTCTGCCGAGTAAGAATACTGAAGATTGAAGATCCGCTTGCGGTATTGGGGGGTGGGTCCTGGTTGTTGGCTCGTCGAACAACAAAAGCCCGGCAAGGG TCAGTGAGTGAACAACTGCACACGCGACAGCCCTTTAGAAGGCTGTCTGAAATAGTTTTGCCCGCAAGGGCAAGTTTCCATTAGCAACTTCGAGAGACGG
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| DNA Sequence for Gene |
>PFL_5448
|dacA
ATGAACATCACCACCTTTGCCAAACGCCTGTGCCTGCTTGTCCCGCTGATCATCACGCCCGCCGCCTGGGCGGTCGAAGCGATGCCGTCGCCACCGCAAC TGGCCGCCAAATCCTATGTGCTCATGGACGCCAGCAGCGGTAACGTGCTGGTGGAGAACAATGGTGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAGCT GATGACCGCCTACATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGCGAGAACGATCCGGTGACCGTCAGCGAGAACGCCTGGCGTACCGGCGGCTCG CGGATGTTCATCAAGGTGGGTTCGCAAGTCACCGTCAGCGACCTGCTGCACGGCATCATCATCCAGTCGGGCAACGACGCCAGCGTCGCGGTTTCCGAGC ATATCGCCGGTAGCGAAGACGCGTTCGCCGACATGATGAACAAGACGGCAACCGACCTGGGCATGAGCAACAGCCACTTCATGAACCCTACCGGCCTGCC GAACCCAGAGCATTACTCGTCGGCCCATGACATGGCGGTGCTGGCTCGCGCGATCATCCATGAAGACCCTGCGCACTACGCGATCTACTCGCAGAAGGAG TTCTTCTGGAACGGCATCAAGCAACCCAACCGCAACCTGCTGCTGTGGCGCGACAAGACCGTTGATGGCCTGAAGACCGGCCATACCGACGAAGCCGGCT ACTGCATGGTGTCCTCGGCGGTGCGTGATGGCATGCGCCTGATCGCCGTGGTGTTCGGTACCAACAGCGAACAGGCTCGTGCTGCTGAAACCCAGAAGCT GCTGACTTACGGTTTCCGTTTCTTCGAAACCCAGACCTTCTACCAGAAGGGCACCGAGCTGGCCCAGGCCCAGGTCTGGAAGGGCACCACTCATCAGGTC AAGGCCGGTCTGGCCGAAGACCTGACCATGACTATGCCTAAAGGCCAGTTGAAAAAGCTCGCCGCCAGCATGACCATGAACCCGCAACTGATCGCGCCGA TCGCCAAGGGCGACGTGATTGGTAAAGTCGAAGTGAAACTGGACGACAAGGTGGTGCACAGCGCTGATCTGATCGCCCTGGAAGCGGTCGACGAAGGTGG TATCTTCCGTCGCATGTGGGATAGCATCCGTCTATTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATTGTCGACCTGCGTGGCCCTCGTTCCCCAGTGGAGCGGGGGCCATGTCCGTCGTCCGGCTATACGAGGCCGTTACTGCCATGACAGACACTGACGTTA AGTCGCACAAGATTGAGTTTCCCGTCGATGACTATCCGATCAAGGTGATCGGTGACACGGTTGTCGGCTTCAAGGACACCGTGATCGAGATCCTTGCCAA GTACGCCAAGCTGGACATCAAGTCCCTGGCCGAGCGTCAAAGCAGCAACGGCAAGTACACCACCGTACAACTGCACATCACCGCCACCGGTGAAGACCAA TTGCGTGATATCAATAGTGCCCTGCGTGCTACCGGTGTCGTCCACATGGTGCTGTGATGCCACAGACGCTGGGCTTTCGTGAGCTTGGCCAGATGGCTTA CGAGCCGGTCTGGCAAGCGATGCAGCGCTTTACCAATGAACGCGGTACCGATGCACCGGATGAAGTCTGGCTGGTGCAGCATCCACCGGTATTCACCCAG
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLCLLVPLIITPAAWAVEAMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVAVSEHIAGSEDAFADMMNKTATDLGMSNSHFMNPTGLPNPEHYSSAHDMAVLARAIIHEDPAHYAIYSQKE FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGTELAQAQVWKGTTHQV KAGLAEDLTMTMPKGQLKKLAASMTMNPQLIAPIAKGDVIGKVEVKLDDKVVHSADLIALEAVDEGGIFRRMWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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