Pseudomonas protegens Pf-5, PFL_3182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3182
Name
Replicon chromosome
Genomic location 3663156 - 3664355 (- strand)

Cross-References

RefSeq YP_260288.1
GI 70730547
Entrez 3478095
INSDC AAY92452.1
NCBI Locus Tag PFL_3182
UniParc UPI000054D775
UniProtKB Acc Q4KBU5
UniProtKB ID Q4KBU5_PSEF5
UniRef100 UniRef100_Q4KBU5
UniRef50 UniRef50_Q4KBU5
UniRef90 UniRef90_Q4KBU5

Product

Feature Type CDS
Coding Frame 1
Product Name
NitT family nitrate/nitrite/cyanate ABC transporter periplasmic nitrate/nitrite/cyanate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.96
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 43659.4
Isoelectric Point (pI) 6.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003179 (893 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3182

Human Homologs

References

No references are associated with this feature.