Pseudomonas protegens Pf-5, PFL_3182
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30024 | ALIPHATIC SULFONATES-BINDING PROTEIN-RELATED | - | - | 18 | 377 | 9.0E-45 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 42 | 276 | 7.76E-36 |
| CDD | cd13553 | PBP2_NrtA_CpmA_like | IPR044527 | Nitrate/bicarbonate ABC transporter substrate-binding domain | 43 | 263 | 4.56166E-86 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 145 | 376 | 2.0E-33 |
| NCBIfam | TIGR01409 | JCVI: twin-arginine translocation signal domain | IPR019546 | Twin-arginine translocation pathway, signal sequence, bacterial/archaeal | 9 | 26 | 0.0014 |
| Pfam | PF13379 | NMT1-like family | - | - | 38 | 278 | 1.5E-44 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 40 | 129 | 3.4E-19 |
| SUPERFAMILY | SSF53213 | LigB-like | - | - | 244 | 360 | 4.97E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.