Pseudomonas protegens Pf-5, PFL_1135

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1135
Name
Replicon	chromosome
Genomic location	1302498 - 1303499 (+ strand)

Cross-References

RefSeq	YP_258266.1
GI	70728517
Entrez	3478913
INSDC	AAY90422.1
NCBI Locus Tag	PFL_1135
UniParc	UPI000054CFB5
UniProtKB Acc	Q4KHL7
UniProtKB ID	Q4KHL7_PSEF5
UniRef100	UniRef100_Q4KHL7
UniRef50	UniRef50_Q886S7
UniRef90	UniRef90_K9NGI4

Product

Feature Type	CDS
Coding Frame	1
Product Name	response regulator/diguanylate cyclase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.13
Kyte-Doolittle Hydrophobicity Value	-0.246
Molecular Weight (kDa)	37.2
Isoelectric Point (pI)	5.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000167 (2758 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1135 Search term: response regulator/diguanylate cyclase domain-containing protein

Human Homologs

References