Pseudomonas protegens Pf-5, PFL_0878 (dppA1)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0878
Name	dppA1
Replicon	chromosome
Genomic location	1017972 - 1019567 (- strand)

Cross-References

RefSeq	YP_258010.1
GI	70728261
Entrez	3476803
INSDC	AAY90166.1
NCBI Locus Tag	PFL_0878
UniParc	UPI000054CEB6
UniProtKB Acc	Q4KIC3
UniProtKB ID	Q4KIC3_PSEF5
UniRef100	UniRef100_Q4KIC3
UniRef50	UniRef50_Q87WI5
UniRef90	UniRef90_Q4KIC3

Product

Feature Type	CDS
Coding Frame	1
Product Name	dipeptide ABC transporter periplasmic dipeptide-binding protein DppA 1
Synonyms
Evidence for Translation
Charge (pH 7)	-2.42
Kyte-Doolittle Hydrophobicity Value	-0.349
Molecular Weight (kDa)	58897.8
Isoelectric Point (pI)	6.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 557 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004089 (498 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0878 Search term: dppA1 Search term: dipeptide ABC transporter periplasmic dipeptide-binding protein DppA 1

Human Homologs

References