Pseudomonas protegens Pf-5, PFL_0878 (dppA1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002741	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0043190	ATP-binding cassette (ABC) transporter complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002741	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl02030	Bacterial chemotaxis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd08493	PBP2_DppA_like	-	-	25	515	0.0
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	26	528	0.0
Gene3D	G3DSA:3.90.76.10	-	-	-	43	204	0.0
Pfam	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle	IPR000914	Solute-binding protein family 5 domain	69	449	1.4E-93
PIRSF	PIRSF002741	MppA	IPR030678	Peptide/nickel binding protein, MppA-type	21	530	6.5E-108
FunFam	G3DSA:3.90.76.10:FF:000002	Dipeptide ABC transporter, substrate-binding protein	-	-	45	205	1.7E-76
Gene3D	G3DSA:3.40.190.10	-	-	-	205	519	0.0
Gene3D	G3DSA:3.10.105.10	-	-	-	286	505	0.0
PANTHER	PTHR30290	PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER	IPR039424	Solute-binding protein family 5	36	528	5.9E-108
FunFam	G3DSA:3.40.190.10:FF:000036	Dipeptide ABC transporter, substrate-binding protein	-	-	206	303	1.2E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.