Pseudomonas syringae pv. tomato DC3000, PSPTO_4221

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4221
NCBI Old Locus TagPSPTO4221
Name
Synonym: PSPTO4221
Replicon chromosome
Genomic location 4754310 - 4755749 (- strand)

Cross-References

RefSeq NP_793982.1
GI 28871363
Entrez 1185901
INSDC AAO57677.1
NCBI Locus Tag PSPTO_4221
NCBI Old Locus Tag PSPTO4221
UniParc UPI0000009234
UniProtKB Acc Q87XF7
UniProtKB ID Q87XF7_PSESM
UniRef100 UniRef100_Q87XF7
UniRef50 UniRef50_Q4KGQ4
UniRef90 UniRef90_Q48EU9

Product

Feature Type CDS
Coding Frame 1
Product Name
serine protease, MucD
Synonyms
Evidence for Translation
Charge (pH 7) -0.02
Kyte-Doolittle Hydrophobicity Value -0.073
Molecular Weight (kDa) 50.4
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000740 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4221

Human Homologs

Ensembl 110, assembly GRCh38.p14
HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
E-value: 3.6e-39
Percent Identity: 32.8
Ensembl 110, assembly GRCh38.p14
HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
E-value: 3.6e-39
Percent Identity: 34.0

References

No references are associated with this feature.