Pseudomonas lutea DSM 17257, LT42_RS01975

Gene Feature Overview

Strain	Pseudomonas lutea DSM 17257 GCF_000759445.1|latest
Locus Tag	LT42_RS01975
NCBI Old Locus Tag	LT42_02040
Name	Synonym: LT42_02040
Replicon	Contig001
Genomic location	477905 - 479461 (+ strand)

Cross-References

RefSeq	WP_037009478.1
GI	739144725
INSDC	KGF64782.1
NCBI Locus Tag	LT42_RS01975
NCBI Old Locus Tag	LT42_02040
UniParc	UPI000513DA90
UniProtKB Acc	A0A098SXZ8
UniProtKB ID	A0A098SXZ8_9PSED
UniRef100	UniRef100_A0A098SXZ8
UniRef50	UniRef50_I2BPP2
UniRef90	UniRef90_A0A098SXZ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein ImpA
Synonyms
Evidence for Translation
Charge (pH 7)	-2.28
Kyte-Doolittle Hydrophobicity Value	-0.203
Molecular Weight (kDa)	58.3
Isoelectric Point (pI)	6.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000081 (1178 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: LT42_RS01975 Search term: type VI secretion protein ImpA

Human Homologs

References