Pseudomonas sp. FH4, H097_RS20375 (rimO)

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS20375
NCBI Old Locus Tag	H097_06607
Name	rimO Synonym: H097_06607
Replicon	scf_29086_10.1_contig_1
Genomic location	8897 - 10222 (+ strand)

Cross-References

RefSeq	WP_032858376.1
GI	696282475
INSDC	ETK19806.1
NCBI Locus Tag	H097_RS20375
NCBI Old Locus Tag	H097_06607
UniParc	UPI0003DB7505
UniProtKB Acc	W2DM01
UniProtKB ID	W2DM01_9PSED
UniRef100	UniRef100_W2DM01
UniRef50	UniRef50_A8AIT5
UniRef90	UniRef90_Q4KHA5

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-14.15
Kyte-Doolittle Hydrophobicity Value	-0.138
Molecular Weight (kDa)	49.2
Isoelectric Point (pI)	4.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000882 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS20375 Search term: rimO Search term: ribosomal protein S12 methylthiotransferase

Human Homologs

References