Pseudomonas fluorescens SBW25, PFLU5329

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5329
Name
Replicon chromosome
Genomic location 5854663 - 5858514 (+ strand)

Cross-References

RefSeq YP_002874828.1
GI 229592709
Entrez 7821190
INSDC CAY52459.1
UniParc UPI00019DAFC0
UniProtKB Acc C3K2D2
UniProtKB ID C3K2D2_PSEFS
UniRef100 UniRef100_C3K2D2
UniRef50 UniRef50_D7I509
UniRef90 UniRef90_I2BNQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative sensory box GGDEF/EAL domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -31.84
Kyte-Doolittle Hydrophobicity Value -0.257
Molecular Weight (kDa) 145662.3
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 518 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004258 (973 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5329

Human Homologs

References

No references are associated with this feature.